How plugins are run#

  • Plugin functionality is invoked by Avogadro via two different APIs:

    1. Script API

    2. Package API

  • Each feature that a plugin offers has an identifier as listed in the plugin’s metadata file

  • Features of a script plugin are invoked by Avogadro using pixi run python plugins/python/<plugin>/<identifier>.py [OPTIONS]

  • Features of packages (including Pixi projects) are invoked using pixi run avogadro-<plugin> <identifier> [OPTIONS]

    • e.g. for the mass feature of a plugin called demo the full command would be pixi run avogadro-demo mass

    • The plugin defines an entry point in their pyproject.toml for the plugin’s name prefixed with avogadro- e.g. for a demo plugin:

[project.scripts]
avogadro-demo = "demo:main"

  • A plugin is required to correctly process certain option flags (by which it is meant that the plugin should not crash or error):

    • --lang – though actually changing behaviour based on the accompanying localization string is not obligatory

    • --debug – again, a change in behaviour is not obligatory, though plugins are encouraged to provide more detailed logs and error messages if this flag is passed

    • --print-options – only if the plugin indicates that the interface of a feature’s dialog is to be specified dynamically using user-options = "dynamic", it must respond appropriately to the flag, otherwise it does not need to as it will never be passed

    • electrostatic-models features must respond appropriately (according to what they support) to:

      • --charges

      • --potential

    • file-formats features must respond appropriately (according to what they support) to:

      • --read

      • --write

  • All other option flags used in the plugin API until now are deprecated

    • --run-command and similar are no longer used; if a feature type only ever responds to one kind of request, no flag is needed, it is assumed to be the desired request

    • The information provided by things like --display-name and --menu-path, is now contained in the static metadata

  • Avogadro will now always pass a JSON object as the main argument (following the feature identifier) to all feature types – for details of the contents, see below

    • This is no longer passed on stdin; streams of subsequent data are, however, if relevant for the plugin type

  • Avogadro will now always accept an JSON object as the output of the plugin to stdout – for details of the contents, see below

    • If Avogadro expects a stream of output on stdout, it will first expect a JSON object as the initial output before the stream, and will handle any subsequent JSON object on stdout as an indication that the plugin process should be stopped

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