Difference between revisions of "Developer:Links"
From Avogadro - Free cross-platform molecule editor
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==Other Chemistry Editors & Visualization== | ==Other Chemistry Editors & Visualization== | ||
| − | We want Avogadro to stand up to the best commercial and open source molecular editing and visualization tools. Here are a selection to consider. These are particularly useful when thinking of ideas -- what works and what doesn't: | + | We want Avogadro to stand up to the best commercial and open source molecular editing and visualization tools. Here are a selection to consider. These are particularly useful when thinking of ideas -- what works and what doesn't. This list is hardly complete: |
| + | * [http://www.arguslab.com/ ArgusLab] | ||
| + | * [http://bioclipse.net/ Bioclipse] | ||
| + | * [http://www.brabosphere.be/ Brabosphere] | ||
| + | * [http://www.cse.scitech.ac.uk/qcg/ccp1gui/ CCP1 GUI] | ||
| + | * [http://crk.sourceforge.net/ CRK] | ||
| + | * [http://www.accelrys.com/products/downloads/ds_visualizer/ DS Visualizer] | ||
| + | * [http://gabedit.sourceforge.net/ Gabedit] | ||
* [http://www.gamgi.org/ GAMGI] | * [http://www.gamgi.org/ GAMGI] | ||
| + | * [http://garlic.mefos.hr/garlic/index.html Garlic] | ||
| + | * [http://www.gaussian.com/gv_plat.htm GaussView] | ||
* [http://gdis.sourceforge.net/ GDIS] | * [http://gdis.sourceforge.net/ GDIS] | ||
| − | * [http:// | + | * [http://www.uku.fi/~thassine/projects/ghemical/ Ghemical] |
| − | * [http:// | + | * [http://www.hyper.com/ HyperChem] |
| + | * [http://jmol.sourceforge.net/ Jmol] | ||
* [http://desoft03.usc.es/armando/software/kryomol.html Kryomol] | * [http://desoft03.usc.es/armando/software/kryomol.html Kryomol] | ||
| + | * [http://www.schrodinger.com/ProductDescription.php?mID=6&sID=15&cID=0 Maestro] | ||
| + | * [http://www.ccdc.cam.ac.uk/products/csd_system/mercury_csd/ Mercury] | ||
| + | * [http://www.cmbi.ru.nl/molden/molden.html Molden] | ||
| + | * [http://www.bioinformatics.org/molekel/wiki/ Molekel] | ||
| + | * [http://www.molworks.com/en/ MolWorks] | ||
| + | * [http://www.serenasoft.com/ PCModel] | ||
| + | * [http://pymol.sourceforge.net/ PyMol] | ||
| + | * [http://qutemol.sourceforge.net/ QuteMol] | ||
* [http://wavefun.com/products/spartan.html Spartan] | * [http://wavefun.com/products/spartan.html Spartan] | ||
| + | * [http://www.ddl.unimi.it/vega/index2.htm Vega] | ||
* [http://viewmol.sourceforge.net/screenshots.html ViewMol] | * [http://viewmol.sourceforge.net/screenshots.html ViewMol] | ||
| − | * [http://www. | + | * [http://www.ks.uiuc.edu/Research/vmd/ VMD] |
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* [http://www.webmo.net/tour/ WebMO] | * [http://www.webmo.net/tour/ WebMO] | ||
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==Computational Engines== | ==Computational Engines== | ||
Revision as of 21:30, 16 December 2007
The following are a set of links and bookmarks for developers on a range of useful topics. This includes galleries of example molecular rendering programs,
The links are in no particular order.
Contents
Rendering
- GL to PS OpenGL to PS "printing library." Supports PS, EPS, PDF and SVG.
- Molekel
- Jmol
- BioDesigner
- BioDesigner II
- VMD
- QuteMol
- PyMol
- CrystalMaker
- Dino
- MolMol
- ORTEP ellipses
- VIDA
Surfaces/Mesh Libraries
- Jules Bloomenthal Polygonizer - (looks really good -Geoff)
- Polygonizer++ - public domain C++ code
- Open Molecular Inventor
- VTK
- GTS
- Open Mesh
- OpenVL
- VCG (Used by QuteMol)
- G3D
- Delaunay Mesh Generator
- Isotable
Other Chemistry Editors & Visualization
We want Avogadro to stand up to the best commercial and open source molecular editing and visualization tools. Here are a selection to consider. These are particularly useful when thinking of ideas -- what works and what doesn't. This list is hardly complete:
- ArgusLab
- Bioclipse
- Brabosphere
- CCP1 GUI
- CRK
- DS Visualizer
- Gabedit
- GAMGI
- Garlic
- GaussView
- GDIS
- Ghemical
- HyperChem
- Jmol
- Kryomol
- Maestro
- Mercury
- Molden
- Molekel
- MolWorks
- PCModel
- PyMol
- QuteMol
- Spartan
- Vega
- ViewMol
- VMD
- WebMO
Computational Engines
- MPQC (includes library for handling orbitals)
- GAMESS
- Mopac 2007
- Adaptive Poisson-Boltzmann Solver
