Building Molecules

A key task in Avogadro is building and editing molecules for visualization and simulations. There are several ways to do this, from downloading over the network to free-form drawing and building complex DNA and peptides.

Building Molecules

• Drawing Molecules
• Importing Molecules by Name
• Importing from the Protein Data Bank (PDB)
• Insert Molecular Fragments
• Building with SMILES
• Building DNA or RNA
• Building Peptides